Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm12636-201ENSMUST00000117395 624 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm12704-201ENSMUST00000119789 464 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm16463-201ENSMUST00000120527 721 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Samd15-201ENSMUST00000169669 1194 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-7-201ENSMUST00000180364 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir6410-201ENSMUST00000184204 104 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm27875-201ENSMUST00000184425 123 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm18426-201ENSMUST00000191874 973 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm17967-201ENSMUST00000195319 647 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-6-201ENSMUST00000196127 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-12-201ENSMUST00000197274 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-5-201ENSMUST00000197439 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-10-201ENSMUST00000197745 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-11-201ENSMUST00000197952 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm43315-201ENSMUST00000198120 313 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-4-201ENSMUST00000198665 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm42990-201ENSMUST00000199231 312 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-9-201ENSMUST00000200087 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mir669a-8-201ENSMUST00000200268 87 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm5649-201ENSMUST00000217918 951 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm18387-201ENSMUST00000220333 702 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Nsa2-203ENSMUST00000225410 974 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 AC167192.1-201ENSMUST00000225908 139 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps53Q8CCB4 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm6913-201ENSMUST00000100019 348 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm23942-201ENSMUST00000101956 107 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm11409-201ENSMUST00000118621 403 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm11708-201ENSMUST00000119530 832 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm12237-201ENSMUST00000120158 470 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm15116-201ENSMUST00000122248 663 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm3091-201ENSMUST00000163408 484 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm6647-201ENSMUST00000170514 641 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm18828-202ENSMUST00000181035 310 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm37241-201ENSMUST00000191736 523 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm9442-201ENSMUST00000194242 319 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm42643-201ENSMUST00000200504 279 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm31532-201ENSMUST00000203555 767 ntBASIC5.67□□□□□ -1.5
Vps53Q8CCB4 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms