Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm25564-201ENSMUST00000104604 132 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm11221-201ENSMUST00000117230 597 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm8202-201ENSMUST00000117682 310 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm11719-201ENSMUST00000119399 351 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm5060-201ENSMUST00000120072 599 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm14805-201ENSMUST00000120172 340 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm14237-201ENSMUST00000122080 430 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm18953-201ENSMUST00000175694 300 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm27460-201ENSMUST00000184213 100 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Mir6362-201ENSMUST00000184329 107 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm27385-201ENSMUST00000184747 104 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm29262-201ENSMUST00000190084 196 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm17780-201ENSMUST00000207142 612 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm45365-201ENSMUST00000209489 256 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 AC173482.4-201ENSMUST00000225096 348 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm5612-201ENSMUST00000053326 375 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm8526-201ENSMUST00000079153 475 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm45483-201ENSMUST00000209845 1682 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim47Q8C0E3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm25563-201ENSMUST00000104603 74 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm12765-201ENSMUST00000117273 615 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm12099-201ENSMUST00000118660 750 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm14106-201ENSMUST00000119382 438 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm11388-201ENSMUST00000120908 159 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm25784-201ENSMUST00000122524 81 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm27854-201ENSMUST00000175578 244 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Mir7211-201ENSMUST00000184071 63 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms