Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim35Q8C006 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm14008-201ENSMUST00000120483 274 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm12967-201ENSMUST00000122147 289 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm11506-201ENSMUST00000122414 470 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm23466-201ENSMUST00000157133 106 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm22224-201ENSMUST00000157357 93 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Mir1968-201ENSMUST00000157429 68 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm6061-201ENSMUST00000175860 492 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm7426-201ENSMUST00000179046 404 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm7560-201ENSMUST00000187748 873 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm4332-201ENSMUST00000196114 346 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm6615-201ENSMUST00000199426 631 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm43284-201ENSMUST00000200103 253 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 AC153561.1-201ENSMUST00000215943 469 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim35Q8C006 AV026068-229ENSMUST00000225516 595 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 AC154576.1-201ENSMUST00000225864 563 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm6054-201ENSMUST00000078052 378 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm17199-201ENSMUST00000097296 416 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim35Q8C006 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 AC153532.3-201ENSMUST00000218660 3848 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm22660-201ENSMUST00000104193 130 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm12344-201ENSMUST00000117087 329 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm11781-201ENSMUST00000118328 472 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm25624-201ENSMUST00000157222 275 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm24883-201ENSMUST00000158391 281 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm25162-201ENSMUST00000158906 159 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm24168-201ENSMUST00000178825 107 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm18709-201ENSMUST00000180564 489 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm6075-201ENSMUST00000186816 486 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm37713-201ENSMUST00000191746 198 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim35Q8C006 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 AC118639.1-201ENSMUST00000227204 338 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm22829-201ENSMUST00000083771 106 ntBASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim35Q8C006 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Trim35Q8C006 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Trim35Q8C006 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim35Q8C006 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Trim35Q8C006 Gm42659-201ENSMUST00000196955 1754 ntBASIC7.61□□□□□ -1.19
Trim35Q8C006 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
Trim35Q8C006 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim35Q8C006 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim35Q8C006 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim35Q8C006 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim35Q8C006 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim35Q8C006 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim35Q8C006 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim35Q8C006 Mir763-201ENSMUST00000103249 120 ntBASIC7.61□□□□□ -1.19
Trim35Q8C006 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim35Q8C006 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim35Q8C006 Gm13419-201ENSMUST00000121711 271 ntBASIC7.61□□□□□ -1.19
Trim35Q8C006 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim35Q8C006 Gm16354-201ENSMUST00000155376 150 ntBASIC7.61□□□□□ -1.19
Trim35Q8C006 Gm22217-201ENSMUST00000157556 313 ntBASIC7.61□□□□□ -1.19
Trim35Q8C006 Gm6100-201ENSMUST00000180253 403 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms