Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm15603-201ENSMUST00000119252 492 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm13788-201ENSMUST00000120767 601 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm23496-201ENSMUST00000157741 248 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm24188-201ENSMUST00000157980 108 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm24217-201ENSMUST00000158260 133 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm29332-201ENSMUST00000190829 227 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm17775-201ENSMUST00000198542 258 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Snora52-201ENSMUST00000082732 137 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm24031-201ENSMUST00000083930 131 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Ccdc40Q8BI79 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm23942-201ENSMUST00000101956 107 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm12062-201ENSMUST00000117533 259 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm14784-201ENSMUST00000121604 663 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm24751-201ENSMUST00000157844 102 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm25520-201ENSMUST00000158389 118 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm15508-201ENSMUST00000160330 325 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm28471-201ENSMUST00000185994 615 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm28598-201ENSMUST00000186490 615 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm29268-201ENSMUST00000188669 615 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm29036-201ENSMUST00000189967 877 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm29218-205ENSMUST00000190846 615 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm28978-201ENSMUST00000191120 615 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm37172-201ENSMUST00000191926 615 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm37881-201ENSMUST00000193001 421 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm18382-201ENSMUST00000194394 582 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Mir6994-201ENSMUST00000198985 73 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Mir30b-201ENSMUST00000083542 96 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Mir215-201ENSMUST00000083628 112 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc40Q8BI79 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Ccdc40Q8BI79 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.71□□□□□ -1.65
Ccdc40Q8BI79 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm23594-201ENSMUST00000104307 134 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm24160-201ENSMUST00000104594 126 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm14586-201ENSMUST00000119571 408 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm14927-201ENSMUST00000120283 454 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm13149-201ENSMUST00000122071 339 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm7840-201ENSMUST00000122086 533 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm25923-201ENSMUST00000158312 138 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms