Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 AC154511.1-201ENSMUST00000222578 1587 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 AW046200-203ENSMUST00000211787 2479 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm11975-201ENSMUST00000118772 481 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm12607-201ENSMUST00000120724 493 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm14601-201ENSMUST00000120892 236 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm23435-201ENSMUST00000157183 156 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm15946-201ENSMUST00000160654 423 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm21171-201ENSMUST00000180048 673 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Mir6971-201ENSMUST00000183497 63 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm29086-201ENSMUST00000186774 222 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm29085-201ENSMUST00000187108 225 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm19029-201ENSMUST00000189923 564 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm43554-201ENSMUST00000199987 186 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm25139-201ENSMUST00000083247 210 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm23459-201ENSMUST00000083259 131 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.38□□□□□ -1.39
Trim56Q80VI1 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim56Q80VI1 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm24350-201ENSMUST00000104163 133 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Mir669i-201ENSMUST00000117007 127 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm14082-201ENSMUST00000118582 801 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm12186-201ENSMUST00000119050 945 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm14574-201ENSMUST00000120644 279 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm11677-201ENSMUST00000121349 977 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm14366-201ENSMUST00000121970 730 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm11197-201ENSMUST00000145158 839 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm14651-201ENSMUST00000147192 442 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm21737-201ENSMUST00000178112 664 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm20874-201ENSMUST00000178356 663 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm21744-201ENSMUST00000178403 662 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm20901-201ENSMUST00000180177 664 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm28090-201ENSMUST00000189458 664 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm21647-201ENSMUST00000189755 664 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Mir409-201ENSMUST00000198153 79 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm44074-201ENSMUST00000204562 337 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm36501-201ENSMUST00000221857 745 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms