Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm42583-201ENSMUST00000202678 6700 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm14575-201ENSMUST00000117210 560 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm24363-201ENSMUST00000158440 311 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm20399-201ENSMUST00000174652 132 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm22857-201ENSMUST00000174969 134 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm37682-201ENSMUST00000191776 522 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm37560-201ENSMUST00000194289 1000 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm44984-201ENSMUST00000207802 394 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm18940-201ENSMUST00000222518 871 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm18441-201ENSMUST00000223539 617 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm25377-201ENSMUST00000104334 129 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm25295-201ENSMUST00000122794 306 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm9251-201ENSMUST00000197202 628 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 AC159622.1-201ENSMUST00000221004 554 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm24533-201ENSMUST00000083138 196 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm13581-201ENSMUST00000120675 278 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm11260-201ENSMUST00000121163 942 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm6058-201ENSMUST00000154261 399 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Gm37831-201ENSMUST00000191685 1787 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ush2AQ2QI47 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm37010-201ENSMUST00000194539 1704 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm11970-201ENSMUST00000116105 320 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm11704-201ENSMUST00000120031 214 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm43185-201ENSMUST00000197507 2775 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm23226-201ENSMUST00000116927 103 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm44927-201ENSMUST00000207573 716 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Gm17917-201ENSMUST00000218561 953 ntBASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC2.13□□□□□ -2.07
Ush2AQ2QI47 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms