Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm10237-201ENSMUST00000078393 273 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col17a1Q07563 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm14797-201ENSMUST00000119378 1480 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col17a1Q07563 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm42770-201ENSMUST00000199657 4155 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col17a1Q07563 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm9577-201ENSMUST00000174655 2620 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm25407-201ENSMUST00000104102 134 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Defa-ps13-201ENSMUST00000120695 204 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm8200-201ENSMUST00000122390 222 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col17a1Q07563 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm19791-201ENSMUST00000180398 859 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm29031-201ENSMUST00000185316 614 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm29000-201ENSMUST00000185444 614 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm28204-201ENSMUST00000185934 614 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm28290-201ENSMUST00000186505 614 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm28161-201ENSMUST00000186669 614 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm28749-209ENSMUST00000189599 614 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm20885-201ENSMUST00000190192 654 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm29740-201ENSMUST00000193182 655 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm36866-201ENSMUST00000193343 657 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm36047-201ENSMUST00000193659 657 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm33163-201ENSMUST00000194504 614 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm37719-201ENSMUST00000194615 292 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm20857-201ENSMUST00000194766 657 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm20858-201ENSMUST00000195459 657 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm43828-201ENSMUST00000196890 639 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm19649-201ENSMUST00000201126 822 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm44054-201ENSMUST00000203814 372 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col17a1Q07563 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm8137-201ENSMUST00000218997 463 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 CT030254.3-201ENSMUST00000225959 1231 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 BC023105-201ENSMUST00000073997 1227 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm23970-201ENSMUST00000083319 107 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col17a1Q07563 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.19□□□□□ -1.26
Col17a1Q07563 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
Col17a1Q07563 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm37779-201ENSMUST00000194221 3380 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm14282-201ENSMUST00000119484 240 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm15488-201ENSMUST00000121682 670 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm22311-201ENSMUST00000158006 110 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm24931-201ENSMUST00000158324 107 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Col17a1Q07563 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm8993-201ENSMUST00000182182 983 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm37791-201ENSMUST00000195081 286 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm37614-201ENSMUST00000195645 210 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm17935-201ENSMUST00000196649 772 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Gm43478-201ENSMUST00000200381 292 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC7.18□□□□□ -1.26
Col17a1Q07563 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 AC155922.1-201ENSMUST00000220100 373 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 AC192616.1-201ENSMUST00000221922 132 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 AC113031.2-201ENSMUST00000226132 579 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col17a1Q07563 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col17a1Q07563 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col17a1Q07563 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Col17a1Q07563 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col17a1Q07563 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.18□□□□□ -1.26
Col17a1Q07563 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.18□□□□□ -1.26
Col17a1Q07563 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col17a1Q07563 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col17a1Q07563 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col17a1Q07563 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms