Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Mir449a-201ENSMUST00000083641 91 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm9386-201ENSMUST00000095195 381 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a1Q04857 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.25□□□□□ -1.41
Col6a1Q04857 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm22019-201ENSMUST00000104359 96 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm14919-201ENSMUST00000120839 390 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm14679-201ENSMUST00000121536 722 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm23069-201ENSMUST00000158240 311 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm15914-201ENSMUST00000161922 309 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm20773-201ENSMUST00000178940 681 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm3933-201ENSMUST00000195391 439 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm44142-201ENSMUST00000203358 311 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm44539-201ENSMUST00000206010 238 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm17991-201ENSMUST00000208139 297 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm6702-201ENSMUST00000208496 471 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm45189-201ENSMUST00000208567 363 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm19441-201ENSMUST00000221545 330 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 AC124489.2-201ENSMUST00000223930 589 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm23514-201ENSMUST00000082827 130 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm25512-201ENSMUST00000083863 107 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.24□□□□□ -1.41
Col6a1Q04857 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a1Q04857 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a1Q04857 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm7071-201ENSMUST00000120458 462 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm14998-201ENSMUST00000120502 495 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm13214-201ENSMUST00000122137 408 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a1Q04857 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm25227-201ENSMUST00000158204 112 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a1Q04857 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm15946-201ENSMUST00000160654 423 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm22852-201ENSMUST00000177899 101 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms