Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC6.46□□□□□ -1.37
Col18a1P39061 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC6.46□□□□□ -1.37
Col18a1P39061 Gm3338-201ENSMUST00000220982 269 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Col18a1P39061 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Col18a1P39061 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Col18a1P39061 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Col18a1P39061 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Col18a1P39061 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col18a1P39061 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Col18a1P39061 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col18a1P39061 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm14793-201ENSMUST00000118739 311 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm12433-201ENSMUST00000119659 255 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm13484-201ENSMUST00000120738 412 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm12332-201ENSMUST00000121397 922 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col18a1P39061 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col18a1P39061 Gm24774-201ENSMUST00000157384 134 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm23387-201ENSMUST00000158586 107 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm29228-201ENSMUST00000185489 418 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm28625-201ENSMUST00000188309 205 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm8790-201ENSMUST00000194108 322 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm44354-201ENSMUST00000196017 143 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Mir129b-201ENSMUST00000197461 65 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC6.46□□□□□ -1.38
Col18a1P39061 CT573422.1-201ENSMUST00000216655 405 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col18a1P39061 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.46□□□□□ -1.38
Col18a1P39061 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col18a1P39061 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col18a1P39061 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm25420-201ENSMUST00000104216 127 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col18a1P39061 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm14979-201ENSMUST00000121561 1035 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Gm14500-201ENSMUST00000121647 113 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm22536-201ENSMUST00000158171 134 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm42958-201ENSMUST00000197595 318 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Gm6230-201ENSMUST00000208077 780 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.45□□□□□ -1.38
Col18a1P39061 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.45□□□□□ -1.38
Col18a1P39061 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col18a1P39061 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col18a1P39061 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col18a1P39061 Gm43605-201ENSMUST00000199663 3426 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col18a1P39061 Snord116l9-201ENSMUST00000101891 94 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Gm26504-201ENSMUST00000102033 94 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Col18a1P39061 Gm7834-201ENSMUST00000117560 437 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Gm16359-201ENSMUST00000124511 289 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col18a1P39061 Gm24363-201ENSMUST00000158440 311 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Gm22258-201ENSMUST00000177645 94 ntBASIC6.44□□□□□ -1.38
Col18a1P39061 Gm26502-201ENSMUST00000177732 94 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms