Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm4928-201ENSMUST00000219622 850 ntBASIC3.93□□□□□ -1.78
P20040 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
P20040 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
P20040 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
P20040 Gm7117-201ENSMUST00000071515 387 ntBASIC3.93□□□□□ -1.78
P20040 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
P20040 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
P20040 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
P20040 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
P20040 Gm45235-201ENSMUST00000208016 4465 ntBASIC3.93□□□□□ -1.78
P20040 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
P20040 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.93□□□□□ -1.78
P20040 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
P20040 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.93□□□□□ -1.78
P20040 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.93□□□□□ -1.78
P20040 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
P20040 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
P20040 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
P20040 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
P20040 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.92□□□□□ -1.78
P20040 Gm44567-201ENSMUST00000205645 2631 ntBASIC3.92□□□□□ -1.78
P20040 Svet1-201ENSMUST00000209370 3940 ntBASIC3.92□□□□□ -1.78
P20040 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
P20040 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
P20040 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
P20040 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
P20040 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Gm22778-201ENSMUST00000104090 128 ntBASIC3.92□□□□□ -1.78
P20040 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
P20040 Gm14385-201ENSMUST00000116315 876 ntBASIC3.92□□□□□ -1.78
P20040 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.92□□□□□ -1.78
P20040 Gm5754-201ENSMUST00000118774 892 ntBASIC3.92□□□□□ -1.78
P20040 Gm15206-201ENSMUST00000119143 454 ntBASIC3.92□□□□□ -1.78
P20040 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.92□□□□□ -1.78
P20040 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.92□□□□□ -1.78
P20040 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.92□□□□□ -1.78
P20040 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.92□□□□□ -1.78
P20040 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
P20040 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.92□□□□□ -1.78
P20040 Gm25278-201ENSMUST00000157267 120 ntBASIC3.92□□□□□ -1.78
P20040 Gm22312-201ENSMUST00000158005 130 ntBASIC3.92□□□□□ -1.78
P20040 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
P20040 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Gm21856-201ENSMUST00000187547 696 ntBASIC3.92□□□□□ -1.78
P20040 Gm21735-201ENSMUST00000190360 696 ntBASIC3.92□□□□□ -1.78
P20040 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC3.92□□□□□ -1.78
P20040 Gm37636-201ENSMUST00000193583 359 ntBASIC3.92□□□□□ -1.78
P20040 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.92□□□□□ -1.78
P20040 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.92□□□□□ -1.78
P20040 Gm18442-201ENSMUST00000220925 639 ntBASIC3.92□□□□□ -1.78
P20040 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.92□□□□□ -1.78
P20040 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
P20040 Gm24319-201ENSMUST00000083389 107 ntBASIC3.92□□□□□ -1.78
P20040 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
P20040 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
P20040 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
P20040 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
P20040 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.92□□□□□ -1.78
P20040 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
P20040 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
P20040 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
P20040 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.91□□□□□ -1.78
P20040 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
P20040 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
P20040 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.91□□□□□ -1.78
P20040 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.91□□□□□ -1.78
P20040 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.91□□□□□ -1.78
P20040 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
P20040 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
P20040 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
P20040 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
P20040 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
P20040 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.91□□□□□ -1.78
P20040 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.91□□□□□ -1.78
P20040 Gm4596-201ENSMUST00000117197 442 ntBASIC3.91□□□□□ -1.78
P20040 Gm12448-201ENSMUST00000118852 655 ntBASIC3.91□□□□□ -1.78
P20040 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.91□□□□□ -1.78
P20040 Gm12577-201ENSMUST00000119701 574 ntBASIC3.91□□□□□ -1.78
P20040 Gm12564-201ENSMUST00000119860 321 ntBASIC3.91□□□□□ -1.78
P20040 Gm15019-201ENSMUST00000120148 434 ntBASIC3.91□□□□□ -1.78
P20040 Gm13677-201ENSMUST00000120739 595 ntBASIC3.91□□□□□ -1.78
P20040 Llph-ps1-201ENSMUST00000121281 390 ntBASIC3.91□□□□□ -1.78
P20040 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
P20040 Gm23906-201ENSMUST00000157573 128 ntBASIC3.91□□□□□ -1.78
P20040 Gm25665-201ENSMUST00000157695 110 ntBASIC3.91□□□□□ -1.78
P20040 Gm16589-201ENSMUST00000159522 918 ntBASIC3.91□□□□□ -1.78
P20040 Gm27254-201ENSMUST00000183926 517 ntBASIC3.91□□□□□ -1.78
P20040 Mir6410-201ENSMUST00000184204 104 ntBASIC3.91□□□□□ -1.78
P20040 Gm29588-201ENSMUST00000185738 298 ntBASIC3.91□□□□□ -1.78
P20040 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC3.91□□□□□ -1.78
P20040 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
P20040 Gm36954-201ENSMUST00000195362 363 ntBASIC3.91□□□□□ -1.78
P20040 Gm43586-201ENSMUST00000195948 310 ntBASIC3.91□□□□□ -1.78
P20040 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.91□□□□□ -1.78
P20040 Gm43090-201ENSMUST00000202459 314 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms