Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm26075-201ENSMUST00000104062 121 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm11212-201ENSMUST00000118337 618 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm11262-201ENSMUST00000119326 833 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm5060-201ENSMUST00000120072 599 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm24850-201ENSMUST00000158029 119 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm8035-201ENSMUST00000204625 687 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm45553-201ENSMUST00000209929 507 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm12683-201ENSMUST00000117528 415 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm7219-201ENSMUST00000119619 297 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm6057-201ENSMUST00000195927 314 ntBASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scn3aA2ASI5 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm11874-201ENSMUST00000117437 130 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm14107-201ENSMUST00000117774 330 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm23959-201ENSMUST00000157208 324 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm25369-201ENSMUST00000158848 132 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm24949-201ENSMUST00000183609 215 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm37603-201ENSMUST00000192368 219 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm42451-201ENSMUST00000197410 244 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm4644-201ENSMUST00000197587 400 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm4736-201ENSMUST00000100870 380 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm15916-201ENSMUST00000118355 736 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm23084-201ENSMUST00000157850 114 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm21617-201ENSMUST00000188297 691 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm4501-201ENSMUST00000207330 551 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm4558-201ENSMUST00000207886 521 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Mir370-201ENSMUST00000083499 79 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Olfr713-201ENSMUST00000098139 975 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scn3aA2ASI5 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scn3aA2ASI5 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scn3aA2ASI5 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.53□□□□□ -1.68
Scn3aA2ASI5 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.53□□□□□ -1.68
Scn3aA2ASI5 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Scn3aA2ASI5 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Scn3aA2ASI5 Mir690-201ENSMUST00000102110 109 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms