Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm3362-201ENSMUST00000148102 466 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm4487-201ENSMUST00000150617 442 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm24931-201ENSMUST00000158324 107 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm4617-201ENSMUST00000178993 331 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Mir6416-201ENSMUST00000183664 117 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm29031-201ENSMUST00000185316 614 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm29000-201ENSMUST00000185444 614 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm28204-201ENSMUST00000185934 614 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm28290-201ENSMUST00000186505 614 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm28161-201ENSMUST00000186669 614 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm28749-209ENSMUST00000189599 614 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm37421-201ENSMUST00000193088 132 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm33163-201ENSMUST00000194504 614 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm37072-201ENSMUST00000194570 837 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm42850-201ENSMUST00000202094 201 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm4928-201ENSMUST00000219622 850 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm11905-201ENSMUST00000117653 678 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm12074-201ENSMUST00000120189 219 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm15390-201ENSMUST00000120323 738 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm1866-201ENSMUST00000120701 477 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm12358-201ENSMUST00000121842 520 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm22343-201ENSMUST00000122648 286 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm7855-201ENSMUST00000137737 687 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm7094-201ENSMUST00000178379 366 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28574-201ENSMUST00000185757 699 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28781-201ENSMUST00000185760 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28339-201ENSMUST00000185845 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29062-201ENSMUST00000186032 694 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28943-201ENSMUST00000186187 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29574-201ENSMUST00000186226 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28736-201ENSMUST00000186257 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28828-201ENSMUST00000186601 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28057-201ENSMUST00000186603 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29401-201ENSMUST00000186690 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29178-204ENSMUST00000186784 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28589-201ENSMUST00000186991 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28255-201ENSMUST00000187101 694 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28936-201ENSMUST00000187153 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29307-201ENSMUST00000187367 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29121-201ENSMUST00000187611 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28196-201ENSMUST00000187719 640 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28243-201ENSMUST00000187801 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28397-201ENSMUST00000187970 699 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28844-202ENSMUST00000187977 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29634-201ENSMUST00000188467 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28896-201ENSMUST00000188609 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29545-201ENSMUST00000188878 694 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28699-201ENSMUST00000189193 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29196-201ENSMUST00000189239 618 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29058-201ENSMUST00000189510 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29339-201ENSMUST00000189613 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29624-201ENSMUST00000190018 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28780-201ENSMUST00000190223 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28159-201ENSMUST00000190296 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29366-201ENSMUST00000190481 699 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm28990-207ENSMUST00000191219 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm29407-201ENSMUST00000191468 696 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm37293-201ENSMUST00000191658 295 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm36468-201ENSMUST00000192119 615 ntBASIC4.02□□□□□ -1.77
Trem1Q9JKE2 Gm37433-201ENSMUST00000192695 678 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms