Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm24581-201ENSMUST00000103962 133 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm15313-201ENSMUST00000119179 282 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm11262-201ENSMUST00000119326 833 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm15885-201ENSMUST00000122114 388 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm25058-201ENSMUST00000157365 128 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm24014-201ENSMUST00000157728 157 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm3339-201ENSMUST00000163462 475 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Mir1251-201ENSMUST00000175486 84 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.7□□□□□ -1.5
Cpsf1Q9EPU4 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm11874-201ENSMUST00000117437 130 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm23365-201ENSMUST00000175019 125 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm25960-201ENSMUST00000175110 125 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm44453-201ENSMUST00000175161 126 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm25195-201ENSMUST00000177656 126 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm28396-201ENSMUST00000190309 379 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm8703-201ENSMUST00000203793 730 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Gm25481-201ENSMUST00000083221 158 ntBASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Cpsf1Q9EPU4 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm11406-201ENSMUST00000117418 484 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm15403-201ENSMUST00000119343 1227 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm2182-201ENSMUST00000145243 663 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Mir7047-201ENSMUST00000184595 64 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm43044-201ENSMUST00000198091 379 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm8035-201ENSMUST00000204625 687 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm44871-201ENSMUST00000207821 497 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cpsf1Q9EPU4 Gm11718-201ENSMUST00000119942 537 ntBASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Gm11645-201ENSMUST00000121589 649 ntBASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Mir7658-201ENSMUST00000184043 57 ntBASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.67□□□□□ -1.5
Cpsf1Q9EPU4 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms