Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Clec2f-201ENSMUST00000121051 374 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm22601-201ENSMUST00000157595 250 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm17109-201ENSMUST00000163985 358 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm23365-201ENSMUST00000175019 125 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm25960-201ENSMUST00000175110 125 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm44453-201ENSMUST00000175161 126 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm25195-201ENSMUST00000177656 126 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm28396-201ENSMUST00000190309 379 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm43649-201ENSMUST00000196596 391 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm19196-201ENSMUST00000209258 357 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm45555-201ENSMUST00000210028 2602 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm37628-201ENSMUST00000194644 5440 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm23226-201ENSMUST00000116927 103 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm23391-201ENSMUST00000157579 104 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm22314-201ENSMUST00000158007 281 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm36259-201ENSMUST00000197340 392 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm42451-201ENSMUST00000197410 244 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm23443-201ENSMUST00000082916 128 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm25821-201ENSMUST00000093657 133 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Gm42600-201ENSMUST00000202081 3588 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm23540-201ENSMUST00000157543 164 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm24636-201ENSMUST00000158673 288 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm28941-201ENSMUST00000185536 1017 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 AC153794.2-201ENSMUST00000222650 550 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm7808-201ENSMUST00000082002 387 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm12900-201ENSMUST00000120919 573 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm12276-201ENSMUST00000121709 301 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm5995-201ENSMUST00000204107 1273 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm6261-201ENSMUST00000204707 760 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a6Q8C6K9 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 AC147639.2-202ENSMUST00000224834 1545 ntBASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 AC123705.2-201ENSMUST00000221653 2009 ntBASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Mir879-201ENSMUST00000104703 76 ntBASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Gm10059-201ENSMUST00000131139 171 ntBASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Gm19637-201ENSMUST00000185933 579 ntBASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.67□□□□□ -1.82
Col6a6Q8C6K9 Gm44389-201ENSMUST00000203795 182 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms