Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm14711-201ENSMUST00000117056 217 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm12520-201ENSMUST00000117493 316 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm15772-201ENSMUST00000118533 438 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm11876-201ENSMUST00000120002 269 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm12006-201ENSMUST00000120786 403 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm11797-201ENSMUST00000121336 754 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm16259-201ENSMUST00000145241 553 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm24113-201ENSMUST00000157477 276 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm17177-201ENSMUST00000169144 483 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Mir6344-201ENSMUST00000183462 104 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm27905-201ENSMUST00000184005 207 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm27236-201ENSMUST00000184147 442 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm27588-201ENSMUST00000185096 263 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm18727-201ENSMUST00000185981 553 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm28116-201ENSMUST00000189064 387 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm37243-201ENSMUST00000193407 595 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm38019-201ENSMUST00000195133 380 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm44757-201ENSMUST00000206373 157 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm44820-201ENSMUST00000207420 396 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 AC154390.1-201ENSMUST00000225629 277 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 CT025525.3-201ENSMUST00000228858 366 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm22350-201ENSMUST00000083924 156 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.77□□□□□ -1.32
Usp40Q8BWR4 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm25595-201ENSMUST00000102273 97 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm13771-201ENSMUST00000117988 238 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm15206-201ENSMUST00000119143 454 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm12466-201ENSMUST00000121199 620 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm3221-201ENSMUST00000164869 440 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm25120-201ENSMUST00000180148 79 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm29389-201ENSMUST00000191562 352 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm37837-201ENSMUST00000191743 604 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm38041-201ENSMUST00000194445 661 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm42643-201ENSMUST00000200504 279 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm44088-201ENSMUST00000204595 237 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Mir465-201ENSMUST00000093563 74 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp40Q8BWR4 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.77□□□□□ -1.33
Usp40Q8BWR4 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm14442-201ENSMUST00000119690 1736 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 AC126439.1-201ENSMUST00000226772 2104 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm14756-201ENSMUST00000116395 240 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm13614-201ENSMUST00000117306 503 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm24371-201ENSMUST00000122662 267 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm27659-201ENSMUST00000183472 98 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm27875-201ENSMUST00000184425 123 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms