Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm8202-201ENSMUST00000117682 310 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm11699-201ENSMUST00000119016 401 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm12900-201ENSMUST00000120919 573 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm23501-201ENSMUST00000157744 256 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Scarna13-201ENSMUST00000158164 275 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm22160-201ENSMUST00000158405 328 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm24315-201ENSMUST00000177835 127 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm27849-201ENSMUST00000183673 125 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Mir7235-201ENSMUST00000183796 56 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm17981-201ENSMUST00000191109 739 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm44214-201ENSMUST00000204153 606 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm19196-201ENSMUST00000209258 357 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm18113-201ENSMUST00000220630 303 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 AC154426.1-201ENSMUST00000225614 1132 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 AC140451.2-202ENSMUST00000226156 574 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.4□□□□□ -1.38
Trim56Q80VI1 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim56Q80VI1 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.4□□□□□ -1.39
Trim56Q80VI1 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.4□□□□□ -1.39
Trim56Q80VI1 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.4□□□□□ -1.39
Trim56Q80VI1 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.4□□□□□ -1.39
Trim56Q80VI1 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim56Q80VI1 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Trim56Q80VI1 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim56Q80VI1 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trim56Q80VI1 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.4□□□□□ -1.39
Trim56Q80VI1 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim56Q80VI1 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
Trim56Q80VI1 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm15113-201ENSMUST00000119280 836 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm11254-201ENSMUST00000122368 653 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm26086-201ENSMUST00000157902 263 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm37837-201ENSMUST00000191743 604 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm8911-201ENSMUST00000213986 652 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim56Q80VI1 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm23614-201ENSMUST00000082598 107 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm23508-201ENSMUST00000083079 72 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm9386-201ENSMUST00000095195 381 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.39□□□□□ -1.39
Trim56Q80VI1 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim56Q80VI1 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms