Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC153852.1-201ENSMUST00000217881 567 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col18a1P39061 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.49□□□□□ -1.37
Col18a1P39061 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.49□□□□□ -1.37
Col18a1P39061 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col18a1P39061 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col18a1P39061 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC6.48□□□□□ -1.37
Col18a1P39061 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.48□□□□□ -1.37
Col18a1P39061 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col18a1P39061 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Col18a1P39061 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
Col18a1P39061 Mir582-201ENSMUST00000103758 81 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col18a1P39061 Gm14985-201ENSMUST00000118693 786 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Gm14303-201ENSMUST00000121320 171 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC6.48□□□□□ -1.37
Col18a1P39061 Gm25428-201ENSMUST00000157608 114 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Gm24734-201ENSMUST00000158860 262 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.48□□□□□ -1.37
Col18a1P39061 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.48□□□□□ -1.37
Col18a1P39061 Gm4045-201ENSMUST00000204076 310 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Gm44816-201ENSMUST00000206666 477 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 AC131720.3-201ENSMUST00000219113 275 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 AC167140.1-201ENSMUST00000224710 403 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.48□□□□□ -1.37
Col18a1P39061 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col18a1P39061 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm23653-201ENSMUST00000116751 97 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm12044-201ENSMUST00000120335 213 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm5924-201ENSMUST00000132554 871 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm24960-201ENSMUST00000157923 90 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm21815-201ENSMUST00000178213 664 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm26933-201ENSMUST00000182320 827 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm6802-202ENSMUST00000186566 126 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm44274-201ENSMUST00000203417 256 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm9973-202ENSMUST00000220926 166 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm46998-201ENSMUST00000221444 330 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 AC164437.2-201ENSMUST00000228915 797 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm9762-201ENSMUST00000036976 444 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col18a1P39061 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col18a1P39061 Mir323-201ENSMUST00000083683 86 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Col18a1P39061 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Col18a1P39061 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col18a1P39061 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.47□□□□□ -1.37
Col18a1P39061 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col18a1P39061 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.47□□□□□ -1.37
Col18a1P39061 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col18a1P39061 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC6.46□□□□□ -1.37
Col18a1P39061 Mup-ps17-201ENSMUST00000120723 218 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Col18a1P39061 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC6.46□□□□□ -1.37
Col18a1P39061 Gm21729-201ENSMUST00000180058 664 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Gm21853-201ENSMUST00000180071 664 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Gm26993-201ENSMUST00000182766 789 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Gm28471-201ENSMUST00000185994 615 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.46□□□□□ -1.37
Col18a1P39061 Gm29263-201ENSMUST00000188718 463 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Gm29495-201ENSMUST00000189319 664 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.46□□□□□ -1.37
Col18a1P39061 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Col18a1P39061 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms