Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.71□□□□□ -1.65
Col2a1P28481 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Col2a1P28481 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
Col2a1P28481 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.71□□□□□ -1.65
Col2a1P28481 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col2a1P28481 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col2a1P28481 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col2a1P28481 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col2a1P28481 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col2a1P28481 Gm11719-201ENSMUST00000119399 351 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Gm6079-201ENSMUST00000121356 404 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Gm13092-201ENSMUST00000136346 260 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Gm23082-201ENSMUST00000157852 133 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Gm28196-201ENSMUST00000187719 640 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.71□□□□□ -1.66
Col2a1P28481 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.71□□□□□ -1.66
Col2a1P28481 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Gm25481-201ENSMUST00000083221 158 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col2a1P28481 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col2a1P28481 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col2a1P28481 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col2a1P28481 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col2a1P28481 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col2a1P28481 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col2a1P28481 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col2a1P28481 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.71□□□□□ -1.66
Col2a1P28481 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col2a1P28481 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm26418-201ENSMUST00000104275 137 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Gm11645-201ENSMUST00000121589 649 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col2a1P28481 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm23860-201ENSMUST00000179446 132 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Gm28941-201ENSMUST00000185536 1017 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm17954-201ENSMUST00000195893 607 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm6929-201ENSMUST00000210930 468 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Gm7439-201ENSMUST00000214053 835 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Gm17829-201ENSMUST00000219782 344 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col2a1P28481 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.7□□□□□ -1.66
Col2a1P28481 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col2a1P28481 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col2a1P28481 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Col2a1P28481 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col2a1P28481 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Col2a1P28481 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col2a1P28481 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col2a1P28481 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Col2a1P28481 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Col2a1P28481 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col2a1P28481 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Col2a1P28481 Mir690-201ENSMUST00000102110 109 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm28654-201ENSMUST00000189801 379 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm37828-201ENSMUST00000192496 432 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm37791-201ENSMUST00000195081 286 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm8288-201ENSMUST00000223406 593 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Gm7099-201ENSMUST00000080066 554 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Col2a1P28481 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Col2a1P28481 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col2a1P28481 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col2a1P28481 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col2a1P28481 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col2a1P28481 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Gm11406-201ENSMUST00000117418 484 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm11781-201ENSMUST00000118328 472 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm11385-201ENSMUST00000121513 570 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm12693-201ENSMUST00000121965 483 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm27773-201ENSMUST00000184087 78 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm6075-201ENSMUST00000186816 486 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Gm43814-201ENSMUST00000197851 413 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms