Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm9078-201ENSMUST00000119126 617 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm8317-201ENSMUST00000121261 471 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm11341-201ENSMUST00000122316 447 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm25826-201ENSMUST00000157090 137 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm24901-201ENSMUST00000158125 110 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm26352-201ENSMUST00000158223 125 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm24767-201ENSMUST00000158509 95 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm25397-201ENSMUST00000176951 92 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm28151-201ENSMUST00000189404 951 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm37523-201ENSMUST00000194901 412 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm9278-201ENSMUST00000205508 553 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm3690-201ENSMUST00000211341 262 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC163646.2-201ENSMUST00000227962 141 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Pcdh1F7BJK1 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm11878-201ENSMUST00000117908 400 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm13013-201ENSMUST00000119087 523 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm13482-201ENSMUST00000119842 254 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm14392-201ENSMUST00000120332 401 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm12110-201ENSMUST00000121601 579 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm24385-201ENSMUST00000122694 350 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm24741-201ENSMUST00000158857 106 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm16101-201ENSMUST00000160695 430 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm26898-201ENSMUST00000181678 384 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms