Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm28358-202ENSMUST00000189292 223 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm18445-201ENSMUST00000195502 774 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm17887-201ENSMUST00000200194 547 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm43856-201ENSMUST00000197004 369 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm6214-201ENSMUST00000178845 541 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm17917-201ENSMUST00000218561 953 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm24533-201ENSMUST00000083138 196 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm650-201ENSMUST00000144428 1551 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm43314-201ENSMUST00000196744 2231 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm22322-201ENSMUST00000157151 111 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm4468-201ENSMUST00000170206 294 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm23510-201ENSMUST00000083083 163 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.04□□□□□ -1.76
Col6a3E9PWQ3 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm12131-201ENSMUST00000117479 359 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm14647-201ENSMUST00000119392 680 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm24944-201ENSMUST00000158330 128 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm23226-201ENSMUST00000116927 103 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm12062-201ENSMUST00000117533 259 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm13873-201ENSMUST00000119208 427 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm11631-201ENSMUST00000119220 156 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm13852-201ENSMUST00000122350 242 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm44084-201ENSMUST00000203947 409 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm6240-201ENSMUST00000208014 473 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a3E9PWQ3 Gm26019-201ENSMUST00000104407 119 ntBASIC4.03□□□□□ -1.77
Col6a3E9PWQ3 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.03□□□□□ -1.77
Col6a3E9PWQ3 Gm4222-201ENSMUST00000165784 470 ntBASIC4.03□□□□□ -1.77
Col6a3E9PWQ3 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.03□□□□□ -1.77
Col6a3E9PWQ3 Gm19186-201ENSMUST00000219922 333 ntBASIC4.03□□□□□ -1.77
Col6a3E9PWQ3 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Col6a3E9PWQ3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms