Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lgr5Q9Z1P4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Mir8112-201ENSMUST00000184382 131 ntBASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lgr5Q9Z1P4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.04■□□□□ 0.96
Lgr5Q9Z1P4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lgr5Q9Z1P4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lgr5Q9Z1P4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lgr5Q9Z1P4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lgr5Q9Z1P4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lgr5Q9Z1P4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.03■□□□□ 0.96
Lgr5Q9Z1P4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Grk6-206ENSMUST00000224995 2971 ntBASIC21.02■□□□□ 0.96
Lgr5Q9Z1P4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Gm18958-201ENSMUST00000174258 762 ntBASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Gm17807-201ENSMUST00000186869 298 ntBASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.01■□□□□ 0.95
Lgr5Q9Z1P4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Gm11860-201ENSMUST00000122346 1010 ntBASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lgr5Q9Z1P4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lgr5Q9Z1P4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms