Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcb1Q9Z0H3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcb1Q9Z0H3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Gm6659-201ENSMUST00000174752 547 ntBASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcb1Q9Z0H3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Smarcb1Q9Z0H3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcb1Q9Z0H3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcb1Q9Z0H3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcb1Q9Z0H3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Gm18101-201ENSMUST00000215769 548 ntBASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcb1Q9Z0H3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcb1Q9Z0H3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms