Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn3Q9Z0G9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn3Q9Z0G9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn3Q9Z0G9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn3Q9Z0G9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn3Q9Z0G9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn3Q9Z0G9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Gm22240-201ENSMUST00000175225 82 ntBASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Gm8969-201ENSMUST00000199694 526 ntBASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Cldn3Q9Z0G9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn3Q9Z0G9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms