Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Gm18958-201ENSMUST00000174258 762 ntBASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Gm20614-201ENSMUST00000177106 632 ntBASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Gm7063-201ENSMUST00000186840 981 ntBASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx6Q9R1R0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx6Q9R1R0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lhx6Q9R1R0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx6Q9R1R0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Gm22993-201ENSMUST00000175423 254 ntBASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Gm37935-201ENSMUST00000192012 982 ntBASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx6Q9R1R0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Gm14716-201ENSMUST00000120138 718 ntBASIC16.37■□□□□ 0.21
Lhx6Q9R1R0 Gm13366-201ENSMUST00000122198 970 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms