Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.11■□□□□ 0.33
Cdh17Q9R100 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh17Q9R100 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh17Q9R100 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.1■□□□□ 0.33
Cdh17Q9R100 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Mtag2-201ENSMUST00000058665 714 ntBASIC17.1■□□□□ 0.33
Cdh17Q9R100 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh17Q9R100 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Gm12933-201ENSMUST00000120203 872 ntBASIC17.09■□□□□ 0.33
Cdh17Q9R100 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.09■□□□□ 0.33
Cdh17Q9R100 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh17Q9R100 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh17Q9R100 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh17Q9R100 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh17Q9R100 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh17Q9R100 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh17Q9R100 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Cdh17Q9R100 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh17Q9R100 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdh17Q9R100 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.08■□□□□ 0.32
Cdh17Q9R100 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh17Q9R100 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Gm37179-201ENSMUST00000194862 823 ntBASIC17.07■□□□□ 0.32
Cdh17Q9R100 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Cdh17Q9R100 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh17Q9R100 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh17Q9R100 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdh17Q9R100 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdh17Q9R100 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.06■□□□□ 0.32
Cdh17Q9R100 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh17Q9R100 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh17Q9R100 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdh17Q9R100 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms