Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Gm2399-201ENSMUST00000104944 225 ntBASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Gm13148-201ENSMUST00000118892 745 ntBASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Gm38285-201ENSMUST00000192928 922 ntBASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Herpud1Q9JJK5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Herpud1Q9JJK5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Herpud1Q9JJK5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Herpud1Q9JJK5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Herpud1Q9JJK5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Gm26524-201ENSMUST00000192339 390 ntBASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.58□□□□□ -0.08
Herpud1Q9JJK5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Gm44549-201ENSMUST00000208351 577 ntBASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herpud1Q9JJK5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Herpud1Q9JJK5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herpud1Q9JJK5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms