Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1fQ9JIS7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1fQ9JIS7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cacna1fQ9JIS7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1fQ9JIS7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Gm26039-201ENSMUST00000158152 144 ntBASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1fQ9JIS7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1fQ9JIS7 Gm34391-201ENSMUST00000203706 907 ntBASIC19.91■□□□□ 0.78
Cacna1fQ9JIS7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1fQ9JIS7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1fQ9JIS7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cacna1fQ9JIS7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1fQ9JIS7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1fQ9JIS7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacna1fQ9JIS7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms