Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl28Q9JIL2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm7290-201ENSMUST00000104990 617 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm12918-201ENSMUST00000120234 636 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm15710-201ENSMUST00000121821 636 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm6211-202ENSMUST00000167849 925 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm27405-201ENSMUST00000184201 112 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm5075-201ENSMUST00000196916 622 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl28Q9JIL2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl28Q9JIL2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl28Q9JIL2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms