Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3bQ9ES34 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Gm10231-201ENSMUST00000181584 441 ntBASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Gm10175-202ENSMUST00000208752 441 ntBASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Gm9731-201ENSMUST00000209480 747 ntBASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Il3ra-202ENSMUST00000223589 738 ntBASIC20.85■□□□□ 0.93
Ube3bQ9ES34 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3bQ9ES34 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Gm17661-201ENSMUST00000170317 270 ntBASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ube3bQ9ES34 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3bQ9ES34 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ube3bQ9ES34 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3bQ9ES34 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.83■□□□□ 0.93
Ube3bQ9ES34 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.83■□□□□ 0.93
Ube3bQ9ES34 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3bQ9ES34 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.83■□□□□ 0.93
Ube3bQ9ES34 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3bQ9ES34 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ube3bQ9ES34 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.83■□□□□ 0.92
Ube3bQ9ES34 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ube3bQ9ES34 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ube3bQ9ES34 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ube3bQ9ES34 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3bQ9ES34 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Gm2274-201ENSMUST00000184539 609 ntBASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3bQ9ES34 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3bQ9ES34 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms