Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.4■□□□□ 0.22
Rtp4Q9ER80 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.39■□□□□ 0.22
Rtp4Q9ER80 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
Rtp4Q9ER80 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtp4Q9ER80 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtp4Q9ER80 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Gm38285-201ENSMUST00000192928 922 ntBASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp4Q9ER80 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Gm43183-201ENSMUST00000200632 547 ntBASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Gm10138-203ENSMUST00000206952 366 ntBASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp4Q9ER80 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Mir5122-201ENSMUST00000175004 89 ntBASIC16.37■□□□□ 0.21
Rtp4Q9ER80 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.37■□□□□ 0.21
Rtp4Q9ER80 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp4Q9ER80 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Gm13836-201ENSMUST00000121159 501 ntBASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Gm42545-201ENSMUST00000202755 922 ntBASIC16.36■□□□□ 0.21
Rtp4Q9ER80 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtp4Q9ER80 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtp4Q9ER80 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms