Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Gm37935-201ENSMUST00000192012 982 ntBASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-4Q9EQM3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Gm15794-201ENSMUST00000120182 631 ntBASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Gm12895-201ENSMUST00000122214 226 ntBASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Gm27525-201ENSMUST00000184465 107 ntBASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Gm18206-201ENSMUST00000207027 926 ntBASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-4Q9EQM3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-4Q9EQM3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-4Q9EQM3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-4Q9EQM3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-4Q9EQM3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Gm10052-201ENSMUST00000168019 960 ntBASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Gm7729-201ENSMUST00000050143 801 ntBASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-4Q9EQM3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-4Q9EQM3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms