Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm9013-201ENSMUST00000132939 882 ntBASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Gm5587-201ENSMUST00000206270 674 ntBASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Mir1668-201ENSMUST00000184114 107 ntBASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Gm27704-201ENSMUST00000185094 107 ntBASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Gm37025-201ENSMUST00000195159 829 ntBASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Gm7370-201ENSMUST00000219471 767 ntBASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.16■□□□□ 0.34
Rrp8Q9DB85 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.15■□□□□ 0.34
Rrp8Q9DB85 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Tgds-204ENSMUST00000228543 1594 ntBASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rrp8Q9DB85 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.14■□□□□ 0.34
Rrp8Q9DB85 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rrp8Q9DB85 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rrp8Q9DB85 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Gm9731-201ENSMUST00000209480 747 ntBASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rrp8Q9DB85 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Gm7213-201ENSMUST00000215977 950 ntBASIC17.13■□□□□ 0.33
Rrp8Q9DB85 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp8Q9DB85 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp8Q9DB85 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms