Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gtf3c6Q9D8P7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c6Q9D8P7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c6Q9D8P7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Gm12527-201ENSMUST00000117967 564 ntBASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c6Q9D8P7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c6Q9D8P7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Gm6576-201ENSMUST00000169678 883 ntBASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Gm18666-201ENSMUST00000190039 958 ntBASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Gm37856-201ENSMUST00000191634 999 ntBASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Gm18025-201ENSMUST00000221733 862 ntBASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms