Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp4cQ9D7F7 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.95■□□□□ 0.94
Chmp4cQ9D7F7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp4cQ9D7F7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Gm2399-201ENSMUST00000104944 225 ntBASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp4cQ9D7F7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Gm26524-201ENSMUST00000192339 390 ntBASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp4cQ9D7F7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Mtag2-201ENSMUST00000058665 714 ntBASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Chmp4cQ9D7F7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Gm44549-201ENSMUST00000208351 577 ntBASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp4cQ9D7F7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp4cQ9D7F7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp4cQ9D7F7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms