Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Necab3Q9D6J4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Necab3Q9D6J4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Gm7370-201ENSMUST00000219471 767 ntBASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Il3ra-202ENSMUST00000223589 738 ntBASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Necab3Q9D6J4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Necab3Q9D6J4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Necab3Q9D6J4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Necab3Q9D6J4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Necab3Q9D6J4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Gm33142-201ENSMUST00000193913 867 ntBASIC17.76■□□□□ 0.43
Necab3Q9D6J4 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Necab3Q9D6J4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.75■□□□□ 0.43
Necab3Q9D6J4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Gm25016-201ENSMUST00000158399 131 ntBASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Necab3Q9D6J4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Gm27389-201ENSMUST00000183622 195 ntBASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Necab3Q9D6J4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Gm21559-201ENSMUST00000220638 855 ntBASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Gm8587-201ENSMUST00000076538 843 ntBASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Necab3Q9D6J4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.72■□□□□ 0.43
Necab3Q9D6J4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Necab3Q9D6J4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms