Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShpkQ9D5J6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ShpkQ9D5J6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ShpkQ9D5J6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ShpkQ9D5J6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Gm7417-201ENSMUST00000192950 473 ntBASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShpkQ9D5J6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms