Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps28Q9D1C8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps28Q9D1C8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Gm37055-201ENSMUST00000191866 133 ntBASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Gm29791-202ENSMUST00000207888 369 ntBASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps28Q9D1C8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Mir5122-201ENSMUST00000175004 89 ntBASIC17.92■□□□□ 0.46
Vps28Q9D1C8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps28Q9D1C8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps28Q9D1C8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms