Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Gm42545-201ENSMUST00000202755 922 ntBASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx56Q9D0R4 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ddx56Q9D0R4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx56Q9D0R4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Gm5643-201ENSMUST00000117081 966 ntBASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx56Q9D0R4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.39■□□□□ 0.54
Ddx56Q9D0R4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx56Q9D0R4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Ddx56Q9D0R4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx56Q9D0R4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx56Q9D0R4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx56Q9D0R4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx56Q9D0R4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.38■□□□□ 0.53
Ddx56Q9D0R4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx56Q9D0R4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Ddx56Q9D0R4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx56Q9D0R4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms