Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1bQ9D0N7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1bQ9D0N7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1bQ9D0N7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1bQ9D0N7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chaf1bQ9D0N7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1bQ9D0N7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Gm22325-201ENSMUST00000158904 308 ntBASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1bQ9D0N7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms