Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.74■□□□□ 0.59
Mms19Q9D071 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Mms19Q9D071 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mms19Q9D071 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mms19Q9D071 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Mms19Q9D071 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mms19Q9D071 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mms19Q9D071 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.74■□□□□ 0.59
Mms19Q9D071 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mms19Q9D071 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.73■□□□□ 0.59
Mms19Q9D071 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.73■□□□□ 0.59
Mms19Q9D071 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.73■□□□□ 0.59
Mms19Q9D071 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.73■□□□□ 0.59
Mms19Q9D071 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mms19Q9D071 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.73■□□□□ 0.59
Mms19Q9D071 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mms19Q9D071 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mms19Q9D071 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Mms19Q9D071 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Mms19Q9D071 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.72■□□□□ 0.59
Mms19Q9D071 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Gm11643-201ENSMUST00000119578 864 ntBASIC18.72■□□□□ 0.59
Mms19Q9D071 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Mms19Q9D071 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.72■□□□□ 0.59
Mms19Q9D071 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.72■□□□□ 0.59
Mms19Q9D071 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Mms19Q9D071 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mms19Q9D071 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.71■□□□□ 0.59
Mms19Q9D071 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.71■□□□□ 0.59
Mms19Q9D071 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Mms19Q9D071 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Gm29791-202ENSMUST00000207888 369 ntBASIC18.71■□□□□ 0.59
Mms19Q9D071 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Mms19Q9D071 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mms19Q9D071 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Mms19Q9D071 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.7■□□□□ 0.58
Mms19Q9D071 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Mms19Q9D071 Gm10418-201ENSMUST00000100943 576 ntBASIC18.7■□□□□ 0.58
Mms19Q9D071 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.7■□□□□ 0.58
Mms19Q9D071 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.7■□□□□ 0.58
Mms19Q9D071 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mms19Q9D071 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mms19Q9D071 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mms19Q9D071 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mms19Q9D071 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mms19Q9D071 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.69■□□□□ 0.58
Mms19Q9D071 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mms19Q9D071 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms