Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.36■□□□□ 0.69
Q9CYI0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Q9CYI0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Q9CYI0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Q9CYI0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CYI0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Q9CYI0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Gm10517-202ENSMUST00000192970 758 ntBASIC19.35■□□□□ 0.69
Q9CYI0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.35■□□□□ 0.69
Q9CYI0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Idnk-204ENSMUST00000226010 1898 ntBASIC19.35■□□□□ 0.69
Q9CYI0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CYI0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.34■□□□□ 0.69
Q9CYI0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Q9CYI0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Q9CYI0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.34■□□□□ 0.69
Q9CYI0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Q9CYI0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.34■□□□□ 0.69
Q9CYI0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Q9CYI0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.34■□□□□ 0.69
Q9CYI0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
Q9CYI0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CYI0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CYI0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CYI0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CYI0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CYI0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CYI0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CYI0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Q9CYI0 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.33■□□□□ 0.68
Q9CYI0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Q9CYI0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Gm13401-201ENSMUST00000117074 291 ntBASIC19.32■□□□□ 0.68
Q9CYI0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.32■□□□□ 0.68
Q9CYI0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CYI0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Q9CYI0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Q9CYI0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.31■□□□□ 0.68
Q9CYI0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.31■□□□□ 0.68
Q9CYI0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.31■□□□□ 0.68
Q9CYI0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CYI0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.3■□□□□ 0.68
Q9CYI0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms