Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssu72Q9CY97 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssu72Q9CY97 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssu72Q9CY97 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssu72Q9CY97 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssu72Q9CY97 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.39■□□□□ 0.38
Ssu72Q9CY97 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.39■□□□□ 0.38
Ssu72Q9CY97 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssu72Q9CY97 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms