Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm12382-201ENSMUST00000122005 922 ntBASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg3Q9CQV4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 CT009738.1-201ENSMUST00000219031 809 ntBASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg3Q9CQV4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.58■□□□□ 0.41
Retreg3Q9CQV4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg3Q9CQV4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg3Q9CQV4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg3Q9CQV4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg3Q9CQV4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg3Q9CQV4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retreg3Q9CQV4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Mir1199-201ENSMUST00000117015 119 ntBASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 Gm10517-202ENSMUST00000192970 758 ntBASIC17.55■□□□□ 0.4
Retreg3Q9CQV4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms