Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTRAFQ9CQE8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RTRAFQ9CQE8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTRAFQ9CQE8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTRAFQ9CQE8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Gm15546-201ENSMUST00000122095 826 ntBASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTRAFQ9CQE8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RTRAFQ9CQE8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms