Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tpgs1Q99MS8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tpgs1Q99MS8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.27■□□□□ 0.51
Tpgs1Q99MS8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tpgs1Q99MS8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tpgs1Q99MS8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Tpgs1Q99MS8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tpgs1Q99MS8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Gm37025-201ENSMUST00000195159 829 ntBASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tpgs1Q99MS8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tpgs1Q99MS8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Gm10252-201ENSMUST00000209541 832 ntBASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tpgs1Q99MS8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Gm17661-201ENSMUST00000170317 270 ntBASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.23■□□□□ 0.51
Tpgs1Q99MS8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Gm37055-201ENSMUST00000191866 133 ntBASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpgs1Q99MS8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms