Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col25a1Q99MQ5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col25a1Q99MQ5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col25a1Q99MQ5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col25a1Q99MQ5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col25a1Q99MQ5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col25a1Q99MQ5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col25a1Q99MQ5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col25a1Q99MQ5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Olfr129-201ENSMUST00000122318 993 ntBASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col25a1Q99MQ5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 Gm2756-201ENSMUST00000195851 400 ntBASIC18.09■□□□□ 0.49
Col25a1Q99MQ5 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms