Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd3Q99LE3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Gm43799-201ENSMUST00000201845 579 ntBASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Idnk-204ENSMUST00000226010 1898 ntBASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd3Q99LE3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd3Q99LE3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd3Q99LE3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd3Q99LE3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lysmd3Q99LE3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lysmd3Q99LE3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Gm11539-201ENSMUST00000119837 557 ntBASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Gm13436-201ENSMUST00000120418 567 ntBASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Gm38027-201ENSMUST00000192315 235 ntBASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd3Q99LE3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd3Q99LE3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms