Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk9Q99J95 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk9Q99J95 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cdk9Q99J95 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.65■□□□□ 0.42
Cdk9Q99J95 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdk9Q99J95 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdk9Q99J95 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdk9Q99J95 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdk9Q99J95 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdk9Q99J95 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdk9Q99J95 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Gm10493-201ENSMUST00000097270 612 ntBASIC17.63■□□□□ 0.41
Cdk9Q99J95 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk9Q99J95 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cdk9Q99J95 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.62■□□□□ 0.41
Cdk9Q99J95 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdk9Q99J95 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk9Q99J95 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms