Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm9Q96EQ9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Prdm9Q96EQ9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm9Q96EQ9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm9Q96EQ9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.24■□□□□ 0.35
Prdm9Q96EQ9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Prdm9Q96EQ9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Gm7889-201ENSMUST00000185591 958 ntBASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm9Q96EQ9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Gm7638-201ENSMUST00000121348 967 ntBASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prdm9Q96EQ9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prdm9Q96EQ9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms