Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col20a1Q923P0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Gm13474-201ENSMUST00000122466 815 ntBASIC20.7■□□□□ 0.9
Col20a1Q923P0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Gm17661-201ENSMUST00000170317 270 ntBASIC20.7■□□□□ 0.9
Col20a1Q923P0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.7■□□□□ 0.9
Col20a1Q923P0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.7■□□□□ 0.9
Col20a1Q923P0 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.7■□□□□ 0.9
Col20a1Q923P0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.69■□□□□ 0.9
Col20a1Q923P0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.69■□□□□ 0.9
Col20a1Q923P0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col20a1Q923P0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Gm18101-201ENSMUST00000215769 548 ntBASIC20.67■□□□□ 0.9
Col20a1Q923P0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.67■□□□□ 0.9
Col20a1Q923P0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col20a1Q923P0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.66■□□□□ 0.9
Col20a1Q923P0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col20a1Q923P0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.65■□□□□ 0.9
Col20a1Q923P0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms